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Pubmed link: https://pubmed.ncbi.nlm.nih.gov/?term=lydia%20herzel&sort=pubdate


N2-methylguanosine modifications on human tRNAs and snRNA U6 are important for cell proliferation, protein translation and pre-mRNA splicing. Wang C, Ulryck N, Herzel L, Pythoud N, Kleiber N, Gue ́rineau V, Jactel V, Moritz C, Bohnsack MT, Carapito C, Touboul D, Bohnsack KE, Graille M Nucleic Acids Res. 2023 Jun 7. doi: 10.1093/nar/gkad487

Ubiquitous mRNA decay fragments in E. coli redefine the functional transcriptome.Herzel L, Stanley JA, Yao CC, Li GW Nucleic Acids Research. 2022 May 7. doi: 10.1093/nar/gkac295

Widespread Transcriptional Readthrough Caused by Nab2 Depletion Leads to Chimeric Transcripts with Retained Introns. Alpert T, Straube K, Carrillo Oesterreich F, Herzel L, Neugebauer KM Cell Reports. 2020 Oct 27. doi: 10.1016/j.celrep.2020.108496.

Long-read sequencing of S. pombe nascent RNA reveals coupling among RNA processing events. Herzel L, Straube K, Neugebauer KM Genome Research. 2018 Jun 14. doi: 10.1101/gr.232025.117.

Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry.
Lalanne JB, Taggart JC, Guo MS, Herzel L, Schieler A, Li GW. Cell. 2018 Mar 23. doi: 10.1016/j.cell.2018.03.007.

Splicing and transcription touch base: co-transcriptional spliceosome assembly and function. Herzel L*, Ottoz DSM*, Alpert T, Neugebauer KM, * co-first authors. Nat Rev Mol Cell Biol. 2017 Oct 18. doi: 10.1038/nrm.2017.63. 

Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition.
Despic V, Dejung M, Gu M, Krishnan J, Zhang J, Herzel L, Straube K, Gerstein MB, Butter F, Neugebauer KM. Genome Research. 2017 Apr 5. doi: 10.1101/gr.215954.116.

Perfect timing: splicing and transcription rates in living cells. Alpert T, Herzel L and Neugebauer KM. WIREs RNA. 2016 Nov 21. doi: 10.1002/wrna.1401.

Splicing of nascent RNA coincides with intron exit from RNA polymerase II. Carrillo Oesterreich F*, Herzel L*, Straube K, Hujer K, Howard J, and Neugebauer KM, * co-first authors, listed alphabetically. Cell. 2016 Mar 24. doi: 10.1016/j.cell.2016.02.045.

Quantification of co-transcriptional splicing from RNA-Seq data. Herzel L, Neugebauer KM
Methods. 2015 Apr 27. doi: 10.1016/j.ymeth.2015.04.024.

Counting on co-transcriptional splicing. Brugiolo M*, Herzel L*, Neugebauer KM, * co-first authors, listed alphabetically. F1000Prime Rep. 2013 Apr 2. doi: 10.12703/P5-9.